Brooke Penaluna

Other Publications

• Nabin Baral, Lee K. Cerveny, Brooke E. Penaluna, Brett B. Roper, Daniel Shively, Shelly Witt. 2024. Variations in mentorship across grade levels and career stages among public management professionals
• James S. White, Tobias J. Kock, Brooke E. Penaluna, Stan Gregory, Josh Williams, Randy Wildman. 2024. Expansion of smallmouth bass distribution and habitat overlap with juvenile Chinook salmon in the Willamette River, Oregon
• Ivan Arismendi, Brooke E. Penaluna, Stanley V Gregory. 2024. Trout under drought: A long-term study of annual growth and condition of stream-living Coastal Cutthroat Trout (Oncorhynchus clarkii clarkii)
• Ivan Arismendi, Stanley V Gregory, Douglas S. Bateman, Brooke E. Penaluna. 2024. Shrinking sizes of trout and salamanders are unexplained by climate warming alone
• Stanley Gregory, Linda Ashkenas, Randall Wildman, George Lienkaemper, Ivan Arismendi, Gary A. Lamberti, Mark Meleason, Brooke E. Penaluna, Daniel Sobota. 2024. Long‐term dynamics of large wood in old‐growth and second‐growth stream reaches in the Cascade Range of Oregon
• John Kirkland, Rebecca Flitcroft, Brooke Penaluna. 2024. Living water: Mapping aquatic biodiversity
• Brooke E. Penaluna, Richard Cronn, Laura L. Hauck, Kevin A. Weitemier, Tiffany S. Garcia. 2023. Uncovering the hidden biodiversity of streams at the upper distribution limit of fish
• Laura L. Hauck, Carla L. Atkinson, Jessica A. Homyack, Brooke E. Penaluna, Clay Mangum, Ashley A. Coble, Jami Nettles, Jamie E. Thornton-Frost, Miranda J. Fix. 2023. Molecular identity crisis: environmental DNA metabarcoding meets traditional taxonomy—assessing biodiversity and freshwater mussel populations (Unionidae) in Alabama
• Lee Cerveny, Nabin Baral, Brooke Penaluna, Brett Roper, Daniel Shively, Shelly Witt. 2023. Mentoring in the USDA Forest Service: A survey of aquatic professionals
• Ashley A. Coble, Brooke E. Penaluna, Laura J. Six, Jake Verschuyl. 2023. Fire severity influences large wood and stream ecosystem responses in western Oregon watersheds
• Emily Dziedzic, Brian Sidlauskas, Richard Cronn, James Anthony, Trevan Cornwell, Thomas A. Friesen, Peter Konstantinidis, Brooke E. Penaluna, Staci Stein, Taal Levi. 2023. Creating, curating and evaluating a mitogenomic reference database to improve regional species identification using environmental DNA
• Natasha Vizcarra, Brooke Penaluna. 2023. Examining diversity and inclusion in fisheries and aquatic sciences
• Rebecca L. Flitcroft, Robin Abell, Ian Harrison, Ivan Arismendi, Brooke E. Penaluna. 2023. Making global targets local for freshwater protection
• John Kirkland, Brooke Penaluna, Richard Cronn. 2022. The promise of environmental DNA: Life in Northwest streams revealed through a bottle of water
• Rebecca L. Flitcroft, William R. Brignon, Brian Staab, J. Ryan Bellmore, Jonathan Burnett, Paul Burns, Brian Cluer, Guillermo Giannico, Joseph M. Helstab, Jeremy Jennings, Christopher Mayes, Celeste Mazzacano, Lauren Mork, Kate Meyer, Jay Munyon, Brooke E. Penaluna, Paul Powers, Daniel N. Scott, Steven M. Wondzell. 2022. Rehabilitating valley floors to a Stage 0 condition: A synthesis of opening outcomes.
• John Campbell, Charles Driscoll, Julia Jones, Emery Boose, Hilary Dugan, Peter Groffman, C Rhett Jackson, Jeremy Jones, Glenn Juday, Noah Lottig, Brooke Penaluna, Roger Ruess, Katharine Suding, Jonathan Thompson, Jess K. Zimmerman. 2022. Forest and Freshwater Ecosystem Responses to Climate Change and Variability at US LTER Sites
• Brooke Penaluna, Ivan Arismendi. 2022. The gender gap: Women as authors and leaders in international publications in fisheries science
• Brooke E. Penaluna, Jonathan D. Burnett, Kelly Christiansen, Ivan Arismendi, Sherri L. Johnson, Kitty Griswold, Brett Holycross, Sonja H. Kolstoe. 2022. UPRLIMET: UPstream Regional LiDAR Model for Extent of Trout in stream networks
• Joseph R. Benjamin, Jason B. Dunham, Sherri L. Johnson, Linda Ashkenas, Brooke E. Penaluna, Robert E. Bilby, Douglas Bateman, David Leer, J. Ryan. Bellmore. 2022. Pathways of productivity and influences on top consumers in forested streams
• Brooke E. Penaluna, Jennifer M. Allen, Ivan Arismendi, Taal Levi, Tiffany S. Garcia, Jason K. Walter. 2021. Better boundaries: identifying the upper extent of fish distributions in forested streams using eDNA and electrofishing
• Brooke E. Penaluna, Jason B. Dunham, Heidi V Andersen. 2021. Nowhere to hide: The importance of instream cover for stream‐living Coastal Cutthroat Trout during seasonal low flow
• Jonathan B. Armstrong, Aimee H. Fullerton, Chris E. Jordan, Joseph L. Ebersole, J. Ryan Bellmore, Ivan Arismendi, Brooke E. Penaluna, Gordon H. Reeves. 2021. The importance of warm habitat to the growth regime of cold-water fishes
• Ivan Arismendi, Katherine R. McLaughlin, Brooke E. Penaluna. 2021. The U.S. academic fisheries co‐authorship network under the lens of diversity and inclusion
• Lauren Zatkos, Ivan Arismendi, Sherri L. Johnson, Brooke E. Penaluna. 2021. Geophysical templates modulate the structure of stream food webs dominated by omnivory
• Kevin Weitemier, Brooke E. Penaluna, Laura L. Hauck, Lucas J. Longway, Tiffany Garcia, Richard Cronn. 2021. Estimating the genetic diversity of Pacific salmon and trout using multigene eDNA metabarcoding
• Brooke E. Penaluna, Dan Shively, Brett B. Roper, Lee K. Cerveny, Shelly Witt, John D. Rothlisberger. 2020. Mentoring relates to job satisfaction for fish biologists: a longitudinal study of the USDA Forest Service
• Chelsea Batavia, Brooke Penaluna, Thea Rose Lemberger, Michael Paul. Nelson. 2020. Considering the case for diversity in natural resources
• Ashley A. Coble, Holly Barnard, Enhao Du, Sherri Johnson, Julia Jones, Elizabeth Keppeler, Hyojung Kwon, Timothy E. Link, Brooke E. Penaluna, Maryanne Reiter, Mark River, Klaus Puettmann, Joseph Wagenbrenner. 2020. Long-term hydrological response to forest harvest during seasonal low flow: Potential implications for current forest practices
• Erin F. Abernethy, Ivan Arismendi, Anna G. Boegehold, Checo Colón-Gaud, Matthew R. Cover, Erin I Larson, Eric K. Moody, Brooke E. Penaluna, Arial J. Shogren, Alex J. Webster, M. Megan. Woller-Skar. 2020. Diverse, equitable, and inclusive scientific societies: Progress and opportunities in the Society for Freshwater Science
• Ivan Arismendi, Brooke E. Penaluna, Carlos G. Jara. 2020. Introduced beaver improve growth of non‐native trout in Tierra del Fuego, South America
• Christina A. Murphy, Lauren Zatkos, Kelsi Antonelli, A. Brent Cárdenas, Christina Linkem, Michael Manning, Juan Andres Olivos, Brooke E. Penaluna, Amanda Pollock, Ivan Arismendi. 2020. AFS Roots: Mothers of Fishes
• Lauren Zatkos, Christina A. Murphy, Amanda Pollock, Brooke E. Penaluna, J. Andres Olivos, Emilee Mowlds, Christine Moffitt, Michael Manning, Christina Linkem, Lisa Holst, A. Brent Cárdenas, Ivan Arismendi. 2020. AFS roots: Emmeline Moore, all things to all fishes
• Ashley A. Coble, Camille A. Flinders, Jessica A. Homyack, Brooke E. Penaluna, Richard C. Cronn, Kevin Weitemier. 2019. eDNA as a tool for identifying freshwater species in sustainable forestry: A critical review and potential future applications
• Rebecca Flitcroft, Sarah Lewis, Ivan Arismendi, Chante Davis, Guillermo Giannico, Brooke Penaluna, Mary Santelmann, Mohammad Safeeq, Jeff Snyder. 2019. Using expressed behaviour of coho salmon (Oncorhynchus kisutch) to evaluate the vulnerability of upriver migrants under future hydrological regimes: Management implications and conservation planning
• Laura L. Hauck, Kevin A. Weitemier, Brooke E. Penaluna, Tiffany S. Garcia, Richard Cronn. 2019. Casting a broader net: Using microfluidic metagenomics to capture aquatic biodiversity data from diverse taxonomic targets
• Brooke Penaluna, Loretta Ellenburg. 2019. Reoccurrence of the Umpqua Chub (Oregonichthys kalawatseti) in the North Umpqua after almost a century
• Brooke E. Penaluna, Gordon H. Reeves, Zanethia Barnett, Peter A. Bisson, John M. Buffington, Andy Dolloff, Rebecca Flitcroft, Charles H. Luce, Keith Nislow, John Rothlisberger, Mel.  Warren. 2018. Using natural disturbance and portfolio concepts to guide aquatic-riparian ecosystem management
• Brooke E. Penaluna, Ivan Arismendi. 2018. Unraveling the hidden lives of warm-water fish communities
• Brooke E. Penaluna, Ivan Arismendi, Christine M. Moffitt, Zachary L. Penney. 2017. Nine proposed action areas to enhance diversity and inclusion in the American Fisheries Society
• Michael Schwartz, Brooke Penaluna, Taylor Wilcox. 2017. eDNA sampling: Not just for fisheries biologists anymore
• Brooke E. Penaluna, Deanna H. Olson, Rebecca L. Flitcroft, Matthew A. Weber, J. Ryan Bellmore, Steven M. Wondzell, Jason B. Dunham, Sherri L. Johnson, Gordon H. Reeves. 2017. Aquatic biodiversity in forests: a weak link in ecosystem services resilience
• Brooke E. Penaluna, Alicia Abadía-Cardoso, Jason B. Dunham, Francisco J. García-Dé León, Robert E. Gresswell, Arturo Ruiz Luna, Eric B. Taylor, Bradley B. Shepard, Robert Al-Chokhachy, Clint C. Muhlfeld, Kevin R. Bestgen, Kevin Rogers, Marco A. Escalante, Ernest R. Keeley, Gabriel M. Temple, Jack E. Williams, Kathleen R. Matthews, Ron Pierce, Richard L. Mayden, Ryan P. Kovach, John Carlos Garza, Kurt D. Fausch. 2016. Conservation of native Pacific trout diversity in Western North America
• Ivan Arismendi, Brooke E. Penaluna. 2016. Examining diversity inequities in fisheries science: a call to action
• Andrea Watts, Brooke Penaluna, Jason Dunham. 2016. The idiosyncrasies of streams: local variability mitigates vulnerability of trout to changing conditions
• Brooke Penaluna. 2016. The histories and destinies of Chile and California
• Brooke E. Penaluna. 2016. Conservacion de truchas del Pacifico
• Brooke E. Penaluna, Steve F. Railsback, Jason B. Dunham, Sherri Johnson, Robert E. Bilby, Arne E. Skaugset, Michael Bradford. 2015. The role of the geophysical template and environmental regimes in controlling stream-living trout populations
• Brooke E. Penaluna, David L. G. Noakes. 2015. Instream cover and shade mediate avian predation on trout in semi-natural streams
• Brooke E. Penaluna, Jason B. Dunham, David L. G. Noakes. 2015. Instream cover and shade mediate avian predation on trout in semi-natural streams
• Brooke E. Penaluna, Jason B. Dunham, Steve F. Railsback, Ivan Arismendi, Sherri L. Johnson, Robert E. Bilby, Mohammad Safeeq, Arne E. Skaugset, James P. Meador. 2015. Local variability mediates vulnerability of trout populations to land use and climate change
• Brooke E. Penaluna, Leo R. Bodensteiner. 2015. North Pacific Spiny Dogfish (Squalus suckleyi) presence in Eelgrass habitat in the Salish Sea, Washington
• Ivan Arismendi, Brooke E. Penaluna, Jason B. Dunham, Carlos Garcia de Leaniz, Doris Soto, Ian A. Fleming, Daniel Gomez-Uchida, Gonzalo Gajardo, Pamela V. Varga, Jorge León-Muñoz. 2014. Differential invasion success of salmonids in southern Chile: patterns and hypotheses

Data and Tools

• Interactive Map
  

  The Upper Limit of Fish: Mapping the Upper Extent of Fish in Streams Through Modeling

• Interactive Map
  

  Upstream Regional LiDAR Model of Trout (UPRLIMET) Dashboard

• Center or Group
  

  Northwest Water Research Initiative

  Station

  Pacific Northwest Research Station
• Project
  

  Connectivity of Aquatic Habitats in Space and Time

  Station

  Pacific Northwest Research Station
• Project
  

  Using Experimental Forests to provide insight to the Wildfire Crisis Strategy landscapes

  Station

  Rocky Mountain Research Station
• Project
  

  UPRLIMET: Upstream regional LiDAR model for extent of trout

  Station

  Pacific Northwest Research Station
• Experimental Forest or Range
  

  H.J. Andrews Experimental Forest

  Station

  Pacific Northwest Research Station
• Project
  

  Diversity of Pacific Trout

  Station

  Pacific Northwest Research Station
• Program
  

  Watershed and Aquatic Sciences

  Station

  Pacific Northwest Research Station
• Project
  

  Aquatic Biodiversity

  Station

  Pacific Northwest Research Station
• Project
  

  Instream Habitat Refugia for Trout

  Station

  Pacific Northwest Research Station
• Project
  

  Upper Extent of Fish

  Station

  Pacific Northwest Research Station
• Project
  

  Assessing wildfire risk to municipal drinking water sources

  Station

  Pacific Northwest Research Station
• Project
  

  Linking Fish, Forests, Fire, and Stream Function

  Station

  Pacific Northwest Research Station
• Project
  

  Exploring Freshwater Biodiversity Using eDNA

  Station

  Pacific Northwest Research Station

Other Publications

• Understory
  

  Upper Extent of Fish in Pacific Northwest Streams

Multimedia

• Webinars

  PNW SciCast Webinar: Ecology and Management at the Upper Extent of Fish

• Webinars

  SCIENCEx Genetics: Wildlife and Fish

• Webinars

  SCIENCEx Experimental Forests and Ranges Week: Fire

• Webinars

  PNW SciCast Webinar: The Promise of Environmental DNA (eDNA)

Science Delivery

• Science Findings
  

  Living water: Mapping aquatic biodiversity

• Science Findings
  

  The promise of environmental DNA: Life in Northwest streams revealed through a bottle of water

• Science Findings
  

  The idiosyncrasies of streams: local variability mitigates vulnerability of trout to changing conditions

Features

• Feature Story
  

  Fresh Critical Water

News Releases

• Penaluna named lead scientist at H.J. Andrews Experimental Forest

  • Date

    September 8, 2021
  • News Release

• Thought to Be Extinct for Nearly a Century, Umpqua Chub "Rediscovered"

  • Date

    February 4, 2020
  • News Release